Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.7■□□□□ 0.26
TPM3P06753 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TPM3P06753 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
TPM3P06753 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TPM3P06753 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM3P06753 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
TPM3P06753 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 AC000095.1-201ENST00000603208 874 ntBASIC16.69■□□□□ 0.26
TPM3P06753 LINC01115-203ENST00000606068 577 ntBASIC16.69■□□□□ 0.26
TPM3P06753 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.69■□□□□ 0.26
TPM3P06753 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TPM3P06753 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.69■□□□□ 0.26
TPM3P06753 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TPM3P06753 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TPM3P06753 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
TPM3P06753 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TPM3P06753 AC004461.1-201ENST00000412461 403 ntBASIC16.68■□□□□ 0.26
TPM3P06753 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.68■□□□□ 0.26
TPM3P06753 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.68■□□□□ 0.26
TPM3P06753 AP000344.2-201ENST00000512987 629 ntBASIC16.68■□□□□ 0.26
TPM3P06753 KRT18P58-201ENST00000527480 1120 ntBASIC16.68■□□□□ 0.26
TPM3P06753 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.68■□□□□ 0.26
TPM3P06753 AC093520.2-201ENST00000561830 333 ntBASIC16.68■□□□□ 0.26
TPM3P06753 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.68■□□□□ 0.26
TPM3P06753 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 AC004835.2-201ENST00000603762 682 ntBASIC16.68■□□□□ 0.26
TPM3P06753 AC009093.7-201ENST00000623853 1223 ntBASIC16.68■□□□□ 0.26
TPM3P06753 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.68■□□□□ 0.26
TPM3P06753 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TPM3P06753 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 FAM90A12P-201ENST00000519497 2375 ntBASIC16.68■□□□□ 0.26
TPM3P06753 FAM90A24P-201ENST00000520792 2369 ntBASIC16.68■□□□□ 0.26
TPM3P06753 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TPM3P06753 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.68■□□□□ 0.26
TPM3P06753 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 AC004241.5-201ENST00000623870 2448 ntBASIC16.68■□□□□ 0.26
TPM3P06753 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TPM3P06753 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC16.68■□□□□ 0.26
TPM3P06753 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TPM3P06753 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TPM3P06753 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TPM3P06753 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms