Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.83□□□□□ -0.36
HLA-DQB1P01920 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AC107375.1-201ENST00000564464 2231 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AL035456.1-201ENST00000456064 1369 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 MIR940-201ENST00000401276 94 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 HLA-K-203ENST00000430151 1046 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AC007967.4-201ENST00000614700 386 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 LINC00628-201ENST00000628516 1289 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 VENTXP1-201ENST00000569334 2716 ntBASIC12.82□□□□□ -0.36
HLA-DQB1P01920 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DQB1P01920 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 AL355102.3-201ENST00000554299 1678 ntBASIC12.81□□□□□ -0.36
HLA-DQB1P01920 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DQB1P01920 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms