Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 BAX-205ENST00000391871 687 ntTSL 5 BASIC19.05■□□□□ 0.64
LTN1O94822 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LTN1O94822 STK24P1-201ENST00000455035 1291 ntBASIC19.05■□□□□ 0.64
LTN1O94822 RN7SL23P-201ENST00000484055 275 ntBASIC19.05■□□□□ 0.64
LTN1O94822 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LTN1O94822 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.05■□□□□ 0.64
LTN1O94822 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC19.05■□□□□ 0.64
LTN1O94822 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.05■□□□□ 0.64
LTN1O94822 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.05■□□□□ 0.64
LTN1O94822 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.05■□□□□ 0.64
LTN1O94822 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.05■□□□□ 0.64
LTN1O94822 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LTN1O94822 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.05■□□□□ 0.64
LTN1O94822 SARS-202ENST00000369923 1882 ntTSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 KRT8P18-201ENST00000413425 1445 ntBASIC19.04■□□□□ 0.64
LTN1O94822 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LTN1O94822 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 TPT1P11-201ENST00000458482 498 ntBASIC19.04■□□□□ 0.64
LTN1O94822 AC093826.1-201ENST00000508655 993 ntBASIC19.04■□□□□ 0.64
LTN1O94822 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 VENTXP3-201ENST00000546480 773 ntBASIC19.04■□□□□ 0.64
LTN1O94822 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 AL451007.2-201ENST00000632004 563 ntBASIC19.04■□□□□ 0.64
LTN1O94822 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 BAK1P1-201ENST00000317045 636 ntBASIC19.04■□□□□ 0.64
LTN1O94822 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LTN1O94822 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 ACTG1P19-201ENST00000418987 1116 ntBASIC19.04■□□□□ 0.64
LTN1O94822 HCG27-204ENST00000424675 895 ntTSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 KRT17P4-201ENST00000429445 819 ntBASIC19.04■□□□□ 0.64
LTN1O94822 AC024293.1-201ENST00000467930 498 ntBASIC19.04■□□□□ 0.64
LTN1O94822 AC025186.1-201ENST00000478174 870 ntBASIC19.04■□□□□ 0.64
LTN1O94822 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LTN1O94822 AP005264.5-201ENST00000590066 467 ntBASIC19.04■□□□□ 0.64
LTN1O94822 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC19.04■□□□□ 0.64
LTN1O94822 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LTN1O94822 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LTN1O94822 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC19.03■□□□□ 0.64
LTN1O94822 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LTN1O94822 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 SLC25A15P3-201ENST00000505530 290 ntBASIC19.03■□□□□ 0.64
LTN1O94822 MT2A-202ENST00000561491 581 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 AP005264.6-204ENST00000588436 719 ntBASIC19.03■□□□□ 0.64
LTN1O94822 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.03■□□□□ 0.64
LTN1O94822 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.03■□□□□ 0.64
LTN1O94822 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
LTN1O94822 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LTN1O94822 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC19.02■□□□□ 0.64
LTN1O94822 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.02■□□□□ 0.64
LTN1O94822 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms