Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PMPCBO75439 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 KRT43P-201ENST00000434019 910 ntBASIC15.1■□□□□ 0.01
PMPCBO75439 CROCCP4-201ENST00000457096 498 ntBASIC15.1■□□□□ 0.01
PMPCBO75439 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 AC022447.6-201ENST00000515522 438 ntBASIC15.1■□□□□ 0.01
PMPCBO75439 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.1■□□□□ 0.01
PMPCBO75439 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 AC092135.3-201ENST00000624151 1846 ntBASIC15.1■□□□□ 0.01
PMPCBO75439 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.1■□□□□ 0.01
PMPCBO75439 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.1■□□□□ 0.01
PMPCBO75439 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PMPCBO75439 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.09■□□□□ 0.01
PMPCBO75439 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PMPCBO75439 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PMPCBO75439 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 LINC01230-201ENST00000625222 3017 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.09■□□□□ 0.01
PMPCBO75439 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.09■□□□□ 0.01
PMPCBO75439 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PMPCBO75439 GAPDHP21-201ENST00000450301 1010 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
PMPCBO75439 AC131206.1-201ENST00000538078 1211 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.09■□□□□ 0.01
PMPCBO75439 AC078819.1-201ENST00000547454 765 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 AC012085.1-201ENST00000548270 765 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.09■□□□□ 0.01
PMPCBO75439 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.09■□□□□ 0.01
PMPCBO75439 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 AC138951.2-201ENST00000623455 1161 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PMPCBO75439 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 AC005089.1-201ENST00000619486 2241 ntBASIC15.09■□□□□ 0.01
PMPCBO75439 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PMPCBO75439 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.09■□□□□ 0.01
PMPCBO75439 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms