Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF9O43307 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
ARHGEF9O43307 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF9O43307 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 DGCR5-201ENST00000399539 862 ntBASIC13.91□□□□□ -0.18
ARHGEF9O43307 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 ACA64.2-201ENST00000459014 129 ntBASIC13.91□□□□□ -0.18
ARHGEF9O43307 RN7SL618P-201ENST00000477850 296 ntBASIC13.91□□□□□ -0.18
ARHGEF9O43307 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 KRT17P8-201ENST00000540749 863 ntBASIC13.91□□□□□ -0.18
ARHGEF9O43307 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.91□□□□□ -0.18
ARHGEF9O43307 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.91□□□□□ -0.18
ARHGEF9O43307 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF9O43307 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AL356585.2-201ENST00000625078 2396 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 MIR658-201ENST00000385210 100 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 MEP1AP4-201ENST00000423244 1087 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ZNF890P-202ENST00000530367 1156 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AL512361.1-201ENST00000554200 418 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC010336.2-201ENST00000564226 506 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC015910.1-201ENST00000579400 975 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 AL844908.2-201ENST00000609461 460 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ARHGEF9O43307 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.9□□□□□ -0.18
ARHGEF9O43307 TCAF1P1-201ENST00000414990 2232 ntBASIC13.9□□□□□ -0.18
ARHGEF9O43307 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms