Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CCDC188H7C350 AC015909.5-201ENST00000624336 2266 ntBASIC15.45■□□□□ 0.06
CCDC188H7C350 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CCDC188H7C350 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 AC111170.3-201ENST00000624282 2464 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC188H7C350 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 RPSAP43-201ENST00000402237 625 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC188H7C350 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CNN2P11-201ENST00000429351 262 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC188H7C350 VDAC1P7-201ENST00000462417 847 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC188H7C350 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC188H7C350 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 AC010327.4-202ENST00000591484 748 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 AL671883.3-201ENST00000603274 991 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC188H7C350 AL662799.1-202ENST00000614205 422 ntBASIC15.44■□□□□ 0.06
CCDC188H7C350 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC188H7C350 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CCDC188H7C350 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC188H7C350 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC188H7C350 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 AC027612.1-201ENST00000445234 2395 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC188H7C350 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC188H7C350 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC188H7C350 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC188H7C350 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC188H7C350 KLF2P3-201ENST00000451977 1087 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CCDC188H7C350 AC109322.1-201ENST00000524499 1264 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.43■□□□□ 0.06
CCDC188H7C350 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC188H7C350 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC188H7C350 SRD5A3P1-201ENST00000603021 949 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 AC027612.4-201ENST00000605371 583 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC188H7C350 Z92544.3-201ENST00000624747 417 ntBASIC15.43■□□□□ 0.06
CCDC188H7C350 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC188H7C350 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC188H7C350 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC188H7C350 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms