Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 AC063926.2-201ENST00000623766 1308 ntBASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 AC009093.10-201ENST00000641956 1442 ntBASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 AC011498.7-201ENST00000624986 2027 ntBASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 AC136759.1-202ENST00000530858 2194 ntBASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPB9F8W1W9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AC012617.1-204ENST00000586340 2305 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AC234783.1-201ENST00000441761 496 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 HIST2H2BB-201ENST00000449108 381 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AL035414.1-201ENST00000451327 857 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 ACA64.2-201ENST00000459014 129 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 AC027601.3-201ENST00000622907 509 ntBASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPB9F8W1W9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 SHC1P1-201ENST00000425230 1745 ntBASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPB9F8W1W9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms