Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 IGHV3-71-201ENST00000523324 359 ntBASIC14.09□□□□□ -0.15
LRIT2A6NDA9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AP006547.1-201ENST00000563435 692 ntBASIC14.09□□□□□ -0.15
LRIT2A6NDA9 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.09□□□□□ -0.15
LRIT2A6NDA9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 MIR4259-201ENST00000584466 101 ntBASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AC133552.6-201ENST00000613406 534 ntBASIC14.09□□□□□ -0.15
LRIT2A6NDA9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.09□□□□□ -0.15
LRIT2A6NDA9 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.08□□□□□ -0.15
LRIT2A6NDA9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 AC104581.4-201ENST00000623126 3052 ntBASIC14.08□□□□□ -0.16
LRIT2A6NDA9 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 MIR658-201ENST00000385210 100 ntBASIC14.08□□□□□ -0.16
LRIT2A6NDA9 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 KRT223P-202ENST00000449164 1292 ntBASIC14.08□□□□□ -0.16
LRIT2A6NDA9 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 KHSRPP1-201ENST00000427983 1768 ntBASIC14.08□□□□□ -0.16
LRIT2A6NDA9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
LRIT2A6NDA9 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 C8orf49-201ENST00000525043 1968 ntBASIC14.07□□□□□ -0.16
LRIT2A6NDA9 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRIT2A6NDA9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms