Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 TOMM22P5-201ENST00000416399 439 ntBASIC16.2■□□□□ 0.18
CCDC66A2RUB6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 KRT18P43-201ENST00000469825 1281 ntBASIC16.2■□□□□ 0.18
CCDC66A2RUB6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.2■□□□□ 0.18
CCDC66A2RUB6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.2■□□□□ 0.18
CCDC66A2RUB6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCDC66A2RUB6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AP001972.5-201ENST00000624624 2338 ntBASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.19■□□□□ 0.18
CCDC66A2RUB6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AL596442.2-201ENST00000610240 980 ntBASIC16.19■□□□□ 0.18
CCDC66A2RUB6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.19■□□□□ 0.18
CCDC66A2RUB6 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC66A2RUB6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC66A2RUB6 RPL37AP1-201ENST00000412502 279 ntBASIC16.18■□□□□ 0.18
CCDC66A2RUB6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms