Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 SORD2P-201ENST00000558556 1069 ntBASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 RN7SL470P-201ENST00000583069 259 ntBASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 AC005357.2-202ENST00000590507 1060 ntBASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 AP000322.3-201ENST00000608665 388 ntBASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
MTCL1Q9Y4B5 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LINC00265-2P-201ENST00000413372 782 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 KRT18P66-201ENST00000452970 1269 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LINC00634-202ENST00000505157 222 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 KLF17P1-201ENST00000547105 1126 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LAP3P2-201ENST00000454686 1454 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 RN7SKP109-201ENST00000410592 316 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 RPS23-204ENST00000507980 836 ntTSL 2 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 ALG1L6P-201ENST00000515248 758 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MIR4472-1-201ENST00000584349 80 ntBASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MTCL1Q9Y4B5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTCL1Q9Y4B5 AC006486.2-201ENST00000624246 2199 ntBASIC15.08■□□□□ 0.01
MTCL1Q9Y4B5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTCL1Q9Y4B5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
MTCL1Q9Y4B5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
MTCL1Q9Y4B5 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 PYY2-201ENST00000315776 282 ntBASIC15.08■□□□□ 0
MTCL1Q9Y4B5 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 PSMD4P1-201ENST00000433951 1109 ntBASIC15.08■□□□□ 0
MTCL1Q9Y4B5 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
MTCL1Q9Y4B5 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms