Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 FES-204ENST00000414248 2327 ntTSL 2 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 MIR6769A-201ENST00000617340 73 ntBASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SHROOM4Q9ULL8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 AGPAT5P1-201ENST00000455855 1019 ntBASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 KRT18P9-201ENST00000604826 1300 ntBASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 IL9RP3-201ENST00000442856 1674 ntBASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
SHROOM4Q9ULL8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 AC133540.1-201ENST00000620845 1019 ntBASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 TMBIM7P-202ENST00000641474 1516 ntBASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
SHROOM4Q9ULL8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 ACTBP7-201ENST00000418351 1124 ntBASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 SIGLEC18P-201ENST00000602271 909 ntBASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 BX088702.1-201ENST00000610784 235 ntBASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
SHROOM4Q9ULL8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 AL354861.1-201ENST00000445213 355 ntBASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 RN7SL396P-201ENST00000471086 295 ntBASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 AC027601.3-201ENST00000622907 509 ntBASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 LINC00431-202ENST00000636375 159 ntBASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
SHROOM4Q9ULL8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
SHROOM4Q9ULL8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SHROOM4Q9ULL8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC27.75■■■□□ 2.03
SHROOM4Q9ULL8 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms