Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 AC113935.1-201ENST00000471722 555 ntBASIC18.52■□□□□ 0.55
SCN11AQ9UI33 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC18.52■□□□□ 0.55
SCN11AQ9UI33 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AC232323.1-201ENST00000540724 2099 ntBASIC18.51■□□□□ 0.55
SCN11AQ9UI33 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AC007250.1-201ENST00000608934 338 ntBASIC18.51■□□□□ 0.55
SCN11AQ9UI33 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCN11AQ9UI33 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 BUD31-205ENST00000456893 512 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC023824.1-201ENST00000562945 2975 ntBASIC18.5■□□□□ 0.55
SCN11AQ9UI33 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC009084.3-201ENST00000623356 437 ntBASIC18.5■□□□□ 0.55
SCN11AQ9UI33 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.5■□□□□ 0.55
SCN11AQ9UI33 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 USP39-220ENST00000613444 2161 ntTSL 2 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 Z69890.1-201ENST00000382990 339 ntBASIC18.49■□□□□ 0.55
SCN11AQ9UI33 BAX-205ENST00000391871 687 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.49■□□□□ 0.55
SCN11AQ9UI33 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.49■□□□□ 0.55
SCN11AQ9UI33 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms