Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AC136604.1-201ENST00000418535 575 ntBASIC13.19□□□□□ -0.3
DUX4Q9UBX2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AC135586.1-201ENST00000539323 574 ntBASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.19□□□□□ -0.3
DUX4Q9UBX2 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 Z97205.2-201ENST00000564697 1639 ntBASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 DGCR9-201ENST00000609630 2415 ntBASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 RNA5SP421-201ENST00000516864 134 ntBASIC13.18□□□□□ -0.3
DUX4Q9UBX2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 AL096865.1-201ENST00000606796 927 ntBASIC13.18□□□□□ -0.3
DUX4Q9UBX2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.18□□□□□ -0.3
DUX4Q9UBX2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms