Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 HLA-K-203ENST00000430151 1046 ntBASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AC091804.1-201ENST00000486888 567 ntBASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AL391280.1-201ENST00000506969 1062 ntBASIC14.84□□□□□ -0.03
SPASTQ9UBP0 DUX4L47-201ENST00000566374 394 ntBASIC14.84□□□□□ -0.03
SPASTQ9UBP0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPASTQ9UBP0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPASTQ9UBP0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 CALR4P-201ENST00000431943 946 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 SCARNA20.5-201ENST00000516991 142 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AC106820.3-201ENST00000561653 397 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AC020914.3-201ENST00000594712 304 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AC073413.1-201ENST00000603927 732 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AC138466.3-201ENST00000619983 221 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.83□□□□□ -0.04
SPASTQ9UBP0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPASTQ9UBP0 KRT8P4-201ENST00000509735 1454 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AC138028.6-201ENST00000616106 1482 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AGAP7P-201ENST00000582299 2062 ntBASIC14.82□□□□□ -0.04
SPASTQ9UBP0 AGAP14-201ENST00000624701 2060 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms