Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 RN7SKP230-201ENST00000365642 335 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC007969.1-201ENST00000433675 447 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 RPL7P3-201ENST00000441388 714 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC099548.2-209ENST00000480264 625 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AP003171.2-201ENST00000528208 925 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AP000812.2-201ENST00000538934 718 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 INTS4P1-203ENST00000641008 3683 ntBASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CUEDC1Q9NWM3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AL138725.1-201ENST00000407347 1314 ntBASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AC006453.4-201ENST00000636949 1252 ntBASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CUEDC1Q9NWM3 FKBP4P6-201ENST00000457486 1332 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 SNX18-202ENST00000343017 3140 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AL354989.2-201ENST00000435838 1540 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC006001.1-201ENST00000325130 474 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 MIR1202-201ENST00000408529 83 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 CSF2RBP1-201ENST00000447905 391 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 FTLP10-202ENST00000505798 471 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms