Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 RPS2P28-201ENST00000314255 741 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 IGLL3P-201ENST00000412472 434 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AL390835.1-201ENST00000413941 901 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 RBMY2BP-202ENST00000451071 1156 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC245100.5-201ENST00000452108 331 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AF186996.4-201ENST00000467186 377 ntBASIC17.78■□□□□ 0.44
RTN4Q9NQC3 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTN4Q9NQC3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC022494.1-201ENST00000466044 728 ntBASIC17.77■□□□□ 0.44
RTN4Q9NQC3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC108751.1-201ENST00000490852 363 ntBASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 GOLGA2P5-201ENST00000266746 2395 ntBASIC17.77■□□□□ 0.44
RTN4Q9NQC3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
RTN4Q9NQC3 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4Q9NQC3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4Q9NQC3 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4Q9NQC3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTN4Q9NQC3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.77■□□□□ 0.43
RTN4Q9NQC3 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.76■□□□□ 0.43
RTN4Q9NQC3 VN2R19P-201ENST00000442399 1052 ntBASIC17.76■□□□□ 0.43
RTN4Q9NQC3 ACTR6P1-201ENST00000514311 1104 ntBASIC17.76■□□□□ 0.43
RTN4Q9NQC3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.76■□□□□ 0.43
RTN4Q9NQC3 MIR4751-201ENST00000578027 74 ntBASIC17.76■□□□□ 0.43
RTN4Q9NQC3 AL365330.1-201ENST00000607459 531 ntBASIC17.76■□□□□ 0.43
RTN4Q9NQC3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms