Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 BASP1P1-201ENST00000430708 665 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC104596.2-201ENST00000512793 793 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC055876.2-201ENST00000531834 546 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC023310.3-201ENST00000557027 670 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC100756.1-201ENST00000562736 682 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC138749.3-201ENST00000567691 622 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC092364.2-202ENST00000597012 1073 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AC116165.1-201ENST00000611806 668 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 DMBT1P1-203ENST00000636837 4628 ntBASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
POLR2J3Q9H1A7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 GIMAP3P-201ENST00000495150 836 ntBASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms