Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 BCAS2P2-201ENST00000425064 674 ntBASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 OR5BD1P-201ENST00000532527 817 ntBASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 AC140658.4-201ENST00000561990 352 ntBASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 LINC00431-202ENST00000636375 159 ntBASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH11YQ9BZA8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AC006372.4-201ENST00000624122 1543 ntBASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AC018638.5-201ENST00000450885 754 ntBASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AC026410.1-201ENST00000507366 1101 ntBASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AC084752.1-201ENST00000509766 622 ntBASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PCDH11YQ9BZA8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 LAP3P2-201ENST00000454686 1454 ntBASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 FTX-216ENST00000638985 1367 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 AREG-202ENST00000502307 956 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 C2orf69P1-201ENST00000563532 1093 ntBASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH11YQ9BZA8 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH11YQ9BZA8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11YQ9BZA8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH11YQ9BZA8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms