Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 RNA5SP423-201ENST00000517127 109 ntBASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 AC091544.8-201ENST00000619490 361 ntBASIC17.24■□□□□ 0.35
SLF1Q9BQI6 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 AC007686.3-201ENST00000619017 3487 ntBASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLF1Q9BQI6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 SALL4P5-201ENST00000419001 1760 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 FAM58BP-201ENST00000439056 645 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AC026740.1-201ENST00000607068 791 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AP001505.2-201ENST00000616815 443 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AGAP7P-201ENST00000582299 2062 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 AGAP14-201ENST00000624701 2060 ntBASIC17.23■□□□□ 0.35
SLF1Q9BQI6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLF1Q9BQI6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AL161772.1-201ENST00000610494 4412 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 UPF3AP2-201ENST00000457924 1132 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RPL18P13-201ENST00000478088 569 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 CHMP4BP1-201ENST00000556017 588 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RN7SL774P-201ENST00000577467 290 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AC100757.4-201ENST00000626934 759 ntBASIC17.22■□□□□ 0.35
SLF1Q9BQI6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SLF1Q9BQI6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms