Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 AC010970.1-201ENST00000445125 1848 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 AL359845.1-201ENST00000458202 1648 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 RPL13P2-201ENST00000440687 659 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC9.87□□□□□ -0.83
LITAFQ99732 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 SMN2-210ENST00000511812 867 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 LINC01225-203ENST00000563550 1244 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 AC018845.2-201ENST00000568326 409 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 AC105021.1-202ENST00000570572 669 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC9.87□□□□□ -0.83
LITAFQ99732 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.87□□□□□ -0.83
LITAFQ99732 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 INO80C-210ENST00000590757 595 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LITAFQ99732 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC9.87□□□□□ -0.83
LITAFQ99732 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC9.87□□□□□ -0.83
LITAFQ99732 KRT8P12-202ENST00000472924 1397 ntBASIC9.87□□□□□ -0.83
LITAFQ99732 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC9.87□□□□□ -0.83
LITAFQ99732 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LITAFQ99732 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 RET-205ENST00000615310 4337 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LITAFQ99732 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 AC115284.2-201ENST00000624646 2054 ntBASIC9.86□□□□□ -0.83
LITAFQ99732 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC9.86□□□□□ -0.83
LITAFQ99732 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
LITAFQ99732 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
LITAFQ99732 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
LITAFQ99732 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms