Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.32□□□□□ -0.44
S1PR3Q99500 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
S1PR3Q99500 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.32□□□□□ -0.44
S1PR3Q99500 SPDYE22P-201ENST00000582158 798 ntBASIC12.32□□□□□ -0.44
S1PR3Q99500 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.32□□□□□ -0.44
S1PR3Q99500 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
S1PR3Q99500 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
S1PR3Q99500 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
S1PR3Q99500 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.32□□□□□ -0.44
S1PR3Q99500 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
S1PR3Q99500 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.32□□□□□ -0.44
S1PR3Q99500 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
S1PR3Q99500 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 CALY-203ENST00000368558 825 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
S1PR3Q99500 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 ELK1P1-201ENST00000485699 580 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 AL359711.2-201ENST00000563105 872 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 AC124283.3-201ENST00000570869 594 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 AP005019.2-201ENST00000615104 511 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.31□□□□□ -0.44
S1PR3Q99500 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC097359.2-201ENST00000604992 2389 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
S1PR3Q99500 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.31□□□□□ -0.44
S1PR3Q99500 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 AC023090.2-201ENST00000625182 2110 ntBASIC12.31□□□□□ -0.44
S1PR3Q99500 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
S1PR3Q99500 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
S1PR3Q99500 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
S1PR3Q99500 LINC01230-201ENST00000625222 3017 ntBASIC12.3□□□□□ -0.44
S1PR3Q99500 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
S1PR3Q99500 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
S1PR3Q99500 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms