Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 REXO1L1P-201ENST00000379010 6598 ntBASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 NCLP1-201ENST00000445357 1963 ntBASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.54□□□□□ -0.08
RAB3IPQ96QF0 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AC024075.2-201ENST00000598112 1473 ntBASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 OR7E14P-202ENST00000530490 1290 ntBASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 KRT126P-201ENST00000549467 1181 ntBASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAB3IPQ96QF0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 MKRN5P-201ENST00000445263 1467 ntBASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAB3IPQ96QF0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 EMBP1-201ENST00000458200 901 ntBASIC14.52□□□□□ -0.09
RAB3IPQ96QF0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms