Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CASD1Q96PB1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CASD1Q96PB1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 RPL18AP3-201ENST00000462885 528 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 RN7SL81P-201ENST00000493781 261 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 AC027237.1-201ENST00000560942 655 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 AC087392.5-201ENST00000612517 489 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 AP001184.1-201ENST00000637936 376 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 AGAP7P-201ENST00000582299 2062 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 AGAP14-201ENST00000624701 2060 ntBASIC15.61■□□□□ 0.09
CASD1Q96PB1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CASD1Q96PB1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.61■□□□□ 0.09
CASD1Q96PB1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC018442.1-201ENST00000421439 2061 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC092580.1-201ENST00000433998 658 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 RN7SL277P-201ENST00000481521 288 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 ORAOV1P1-201ENST00000503108 395 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 AC132872.4-202ENST00000622924 2756 ntBASIC15.6■□□□□ 0.09
CASD1Q96PB1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CASD1Q96PB1 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CASD1Q96PB1 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.59■□□□□ 0.09
CASD1Q96PB1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.59■□□□□ 0.09
CASD1Q96PB1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.59■□□□□ 0.09
CASD1Q96PB1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.59■□□□□ 0.09
CASD1Q96PB1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CASD1Q96PB1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms