Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 AL513477.1-201ENST00000602865 2407 ntBASIC15.97■□□□□ 0.15
LRCH3Q96II8 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH3Q96II8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH3Q96II8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 RPL35P9-201ENST00000446059 350 ntBASIC15.96■□□□□ 0.15
LRCH3Q96II8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH3Q96II8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH3Q96II8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.96■□□□□ 0.14
LRCH3Q96II8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRCH3Q96II8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.96■□□□□ 0.14
LRCH3Q96II8 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.96■□□□□ 0.14
LRCH3Q96II8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRCH3Q96II8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRCH3Q96II8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC020910.5-201ENST00000623668 1865 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC006449.6-201ENST00000612330 2296 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AL035696.2-201ENST00000407941 709 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC026434.2-201ENST00000506094 1078 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 HERC2P11-201ENST00000562845 725 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC100756.2-201ENST00000569537 736 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 MED11-202ENST00000573708 802 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AC007952.4-201ENST00000573866 637 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 AL391001.1-201ENST00000602747 715 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 AL512324.3-201ENST00000619383 882 ntBASIC15.95■□□□□ 0.14
LRCH3Q96II8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH3Q96II8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH3Q96II8 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms