Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 POM121L8P-201ENST00000417732 1281 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 POM121L9P-203ENST00000441984 1285 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 HIST2H2BB-201ENST00000449108 381 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 AL109954.1-202ENST00000564051 2148 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 AC015818.8-201ENST00000587907 1519 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RNF31Q96EP0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.4□□□□□ -0.1
RNF31Q96EP0 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF31Q96EP0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.4□□□□□ -0.11
RNF31Q96EP0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 AC005840.4-201ENST00000541242 2494 ntBASIC14.39□□□□□ -0.11
RNF31Q96EP0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 AC009093.2-202ENST00000620513 2079 ntBASIC14.39□□□□□ -0.11
RNF31Q96EP0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 PRSS30P-206ENST00000641773 873 ntBASIC14.39□□□□□ -0.11
RNF31Q96EP0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 CLUHP2-201ENST00000426660 1303 ntBASIC14.39□□□□□ -0.11
RNF31Q96EP0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF31Q96EP0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
RNF31Q96EP0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 AC091951.1-201ENST00000512854 2465 ntBASIC14.38□□□□□ -0.11
RNF31Q96EP0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF31Q96EP0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF31Q96EP0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms