Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC020910.6-201ENST00000623084 1459 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 DNAJB3-202ENST00000449667 1266 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 LINC01115-203ENST00000606068 577 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC105339.1-204ENST00000636249 355 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AC079781.4-201ENST00000641908 219 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 CETN4P-206ENST00000642099 2168 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AL157414.3-201ENST00000624276 1954 ntBASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB3IL1Q8TBN0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 FAM58DP-201ENST00000428076 619 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SPDYE14P-201ENST00000442619 822 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 MIR4469-201ENST00000583919 79 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AL589739.1-201ENST00000607720 493 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 AL596442.2-201ENST00000610240 980 ntBASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB3IL1Q8TBN0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms