Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ZNF439Q8NDP4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC007191.1-201ENST00000623179 2995 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC022616.1-201ENST00000518688 554 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC190387.1-201ENST00000551683 408 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 MIR4745-201ENST00000577608 62 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 WFDC1-204ENST00000613603 549 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AP005019.2-201ENST00000615104 511 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 AC005912.2-201ENST00000619492 2400 ntBASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ZNF439Q8NDP4 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ACKR1-201ENST00000368121 1240 ntBASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ZNF439Q8NDP4 ACTBP8-201ENST00000403258 1108 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms