Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 DUX4L45-201ENST00000566406 1057 ntBASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 MIR3615-201ENST00000581999 87 ntBASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.9□□□□□ -0.02
FBXO39Q8N4B4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 AL158070.2-201ENST00000623713 1621 ntBASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 MIR1247-201ENST00000408206 136 ntBASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FBXO39Q8N4B4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 BX640514.1-201ENST00000583223 1918 ntBASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 AL138799.1-201ENST00000448213 1675 ntBASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 ST20-AS1-201ENST00000560255 4223 ntBASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 GPAA1P2-201ENST00000417923 928 ntBASIC14.88□□□□□ -0.03
FBXO39Q8N4B4 CNN2P8-201ENST00000421872 913 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms