Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 AC022447.6-201ENST00000515522 438 ntBASIC13.3□□□□□ -0.28
LRRC28Q86X40 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 AC092337.1-201ENST00000568699 1129 ntBASIC13.3□□□□□ -0.28
LRRC28Q86X40 AC027307.3-201ENST00000594262 1100 ntBASIC13.3□□□□□ -0.28
LRRC28Q86X40 AL645728.2-202ENST00000641679 227 ntBASIC13.3□□□□□ -0.28
LRRC28Q86X40 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LRRC28Q86X40 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRC28Q86X40 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AC007541.1-201ENST00000570282 1469 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AL591122.2-201ENST00000624125 1853 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 SPDYE19P-201ENST00000338590 713 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 MEP1AP4-201ENST00000423244 1087 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 GNAQP1-201ENST00000444815 1067 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 CRB3P1-201ENST00000449338 276 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AC093004.1-201ENST00000508850 424 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AL391825.1-201ENST00000457671 1364 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.29□□□□□ -0.28
LRRC28Q86X40 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.29□□□□□ -0.28
LRRC28Q86X40 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LRRC28Q86X40 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.28□□□□□ -0.28
LRRC28Q86X40 DFFBP1-201ENST00000433250 979 ntBASIC13.28□□□□□ -0.28
LRRC28Q86X40 TARDBPP1-201ENST00000442013 1203 ntBASIC13.28□□□□□ -0.28
LRRC28Q86X40 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LRRC28Q86X40 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms