Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SPDYE19P-201ENST00000338590 713 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC114501.2-201ENST00000439631 535 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ZNF890P-202ENST00000530367 1156 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC004233.3-201ENST00000607794 1269 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC008761.3-201ENST00000624803 892 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 AC130686.1-201ENST00000622936 2466 ntBASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TUBA1AQ71U36 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC138969.3-201ENST00000546612 1459 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC138932.2-201ENST00000548268 1459 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC126755.4-201ENST00000549796 1459 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC136604.1-201ENST00000418535 575 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 TMEM198B-204ENST00000484016 896 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 Z97205.2-201ENST00000564697 1639 ntBASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TUBA1AQ71U36 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms