Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.75□□□□□ -0.21
H3F3CQ6NXT2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SALL4P5-201ENST00000419001 1760 ntBASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 AC021723.1-201ENST00000486306 515 ntBASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 AC044849.1-201ENST00000519737 1188 ntBASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
H3F3CQ6NXT2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AC016700.1-201ENST00000429424 312 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 GCOM2-201ENST00000509133 1104 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AC131206.1-201ENST00000538078 1211 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 AL606495.2-201ENST00000605867 535 ntBASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
H3F3CQ6NXT2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms