Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC100757.3-201ENST00000622361 1406 ntBASIC13.87□□□□□ -0.19
CD47Q08722 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CD47Q08722 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 AC087499.5-201ENST00000452760 1342 ntBASIC13.87□□□□□ -0.19
CD47Q08722 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.87□□□□□ -0.19
CD47Q08722 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CD47Q08722 AC020658.7-201ENST00000624274 2442 ntBASIC13.86□□□□□ -0.19
CD47Q08722 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD47Q08722 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD47Q08722 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 FAM90A12P-201ENST00000519497 2375 ntBASIC13.86□□□□□ -0.19
CD47Q08722 FAM90A24P-201ENST00000520792 2369 ntBASIC13.86□□□□□ -0.19
CD47Q08722 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CD47Q08722 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 AL133267.1-201ENST00000398220 340 ntBASIC13.86□□□□□ -0.19
CD47Q08722 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 AC092580.3-201ENST00000430932 139 ntBASIC13.86□□□□□ -0.19
CD47Q08722 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.86□□□□□ -0.19
CD47Q08722 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.86□□□□□ -0.19
CD47Q08722 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.86□□□□□ -0.19
CD47Q08722 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
CD47Q08722 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.86□□□□□ -0.19
CD47Q08722 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
CD47Q08722 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CD47Q08722 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CD47Q08722 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CD47Q08722 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.85□□□□□ -0.19
CD47Q08722 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 AC073548.1-201ENST00000624088 1882 ntBASIC13.85□□□□□ -0.19
CD47Q08722 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CD47Q08722 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD47Q08722 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CD47Q08722 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD47Q08722 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CD47Q08722 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.85□□□□□ -0.19
CD47Q08722 AC241585.1-201ENST00000433527 519 ntBASIC13.85□□□□□ -0.19
CD47Q08722 RPL13P2-201ENST00000440687 659 ntBASIC13.85□□□□□ -0.19
CD47Q08722 KRT18P43-201ENST00000469825 1281 ntBASIC13.85□□□□□ -0.19
CD47Q08722 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms