Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.61□□□□□ -0.23
LTBQ06643 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.61□□□□□ -0.23
LTBQ06643 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 AC022616.1-201ENST00000518688 554 ntBASIC13.61□□□□□ -0.23
LTBQ06643 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 AC008735.3-201ENST00000596646 500 ntBASIC13.61□□□□□ -0.23
LTBQ06643 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 AP005019.2-201ENST00000615104 511 ntBASIC13.61□□□□□ -0.23
LTBQ06643 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LTBQ06643 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LTBQ06643 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LTBQ06643 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTBQ06643 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 AC117489.1-201ENST00000625169 3217 ntBASIC13.6□□□□□ -0.23
LTBQ06643 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LTBQ06643 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 AL355994.2-201ENST00000447882 704 ntBASIC13.6□□□□□ -0.23
LTBQ06643 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.6□□□□□ -0.23
LTBQ06643 AC093433.1-201ENST00000458048 571 ntBASIC13.6□□□□□ -0.23
LTBQ06643 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 ENPP7P5-201ENST00000541031 1031 ntBASIC13.6□□□□□ -0.23
LTBQ06643 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.6□□□□□ -0.23
LTBQ06643 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 MIR6727-201ENST00000620702 65 ntBASIC13.6□□□□□ -0.23
LTBQ06643 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
LTBQ06643 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 AC055811.4-201ENST00000624039 1754 ntBASIC13.6□□□□□ -0.23
LTBQ06643 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LTBQ06643 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LTBQ06643 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTBQ06643 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms