Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.58□□□□□ -0.4
SSBP1Q04837 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP1Q04837 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.58□□□□□ -0.4
SSBP1Q04837 AC011498.7-201ENST00000624986 2027 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 AL603764.1-201ENST00000636452 321 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 MKRN5P-201ENST00000445263 1467 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 MRPL37P1-201ENST00000592451 1337 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AGAP10P-201ENST00000454844 2418 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 AC005562.1-201ENST00000583030 3219 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 AC135782.3-201ENST00000562782 2105 ntBASIC12.58□□□□□ -0.4
SSBP1Q04837 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SSBP1Q04837 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SSBP1Q04837 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AL122018.1-201ENST00000446607 2310 ntBASIC12.57□□□□□ -0.4
SSBP1Q04837 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.57□□□□□ -0.4
SSBP1Q04837 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 MRPL3P1-201ENST00000400109 1033 ntBASIC12.57□□□□□ -0.4
SSBP1Q04837 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AC007969.1-201ENST00000433675 447 ntBASIC12.57□□□□□ -0.4
SSBP1Q04837 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.57□□□□□ -0.4
SSBP1Q04837 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AL589739.1-201ENST00000607720 493 ntBASIC12.57□□□□□ -0.4
SSBP1Q04837 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.57□□□□□ -0.4
SSBP1Q04837 AC105339.1-204ENST00000636249 355 ntBASIC12.57□□□□□ -0.4
SSBP1Q04837 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
SSBP1Q04837 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SSBP1Q04837 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SSBP1Q04837 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SSBP1Q04837 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 340.7 ms