Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SCN7AQ01118 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 OR52M2P-201ENST00000414298 959 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN7AQ01118 RN7SL494P-201ENST00000461517 304 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.9■□□□□ 0.46
SCN7AQ01118 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC17.9■□□□□ 0.46
SCN7AQ01118 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 FUCA1P1-201ENST00000374476 1351 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 AC132872.4-202ENST00000622924 2756 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 DDX39AP1-201ENST00000445147 1181 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.9■□□□□ 0.46
SCN7AQ01118 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 AC145285.5-201ENST00000562217 361 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SCN7AQ01118 RN7SL556P-201ENST00000582856 298 ntBASIC17.9■□□□□ 0.46
SCN7AQ01118 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCN7AQ01118 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.9■□□□□ 0.46
SCN7AQ01118 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCN7AQ01118 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SCN7AQ01118 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.89■□□□□ 0.46
SCN7AQ01118 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.89■□□□□ 0.46
SCN7AQ01118 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 AL109809.1-201ENST00000418979 1367 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN7AQ01118 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN7AQ01118 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
SCN7AQ01118 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 ALG1L3P-201ENST00000503331 765 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 KRT18P37-201ENST00000520711 1282 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.89■□□□□ 0.45
SCN7AQ01118 AC010632.2-201ENST00000588369 1224 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN7AQ01118 MIR6746-201ENST00000620971 63 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.89■□□□□ 0.45
SCN7AQ01118 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SCN7AQ01118 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.89■□□□□ 0.45
SCN7AQ01118 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SCN7AQ01118 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SCN7AQ01118 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SCN7AQ01118 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SCN7AQ01118 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN7AQ01118 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN7AQ01118 AC021305.1-201ENST00000520656 1514 ntBASIC17.88■□□□□ 0.45
SCN7AQ01118 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.88■□□□□ 0.45
SCN7AQ01118 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.88■□□□□ 0.45
SCN7AQ01118 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN7AQ01118 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SCN7AQ01118 PTGER4P2-201ENST00000328411 252 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms