Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.29□□□□□ -0.28
ACTA1P68133 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.29□□□□□ -0.28
ACTA1P68133 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.29□□□□□ -0.28
ACTA1P68133 AC093813.1-201ENST00000605066 256 ntBASIC13.29□□□□□ -0.28
ACTA1P68133 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.29□□□□□ -0.28
ACTA1P68133 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.29□□□□□ -0.28
ACTA1P68133 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.29□□□□□ -0.28
ACTA1P68133 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ACTA1P68133 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ACTA1P68133 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.29□□□□□ -0.28
ACTA1P68133 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.29□□□□□ -0.28
ACTA1P68133 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.29□□□□□ -0.28
ACTA1P68133 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ACTA1P68133 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 AC215219.1-201ENST00000400706 1817 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ACTA1P68133 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 AL139094.1-201ENST00000405549 1188 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 AC007969.1-201ENST00000433675 447 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.28□□□□□ -0.28
ACTA1P68133 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.28□□□□□ -0.28
ACTA1P68133 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 DUX4L47-201ENST00000566374 394 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 AL844908.2-201ENST00000609461 460 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 AL391069.4-201ENST00000609583 481 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.28□□□□□ -0.28
ACTA1P68133 PRSS30P-206ENST00000641773 873 ntBASIC13.28□□□□□ -0.28
ACTA1P68133 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
ACTA1P68133 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.28□□□□□ -0.28
ACTA1P68133 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ACTA1P68133 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ACTA1P68133 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ACTA1P68133 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
ACTA1P68133 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.27□□□□□ -0.28
ACTA1P68133 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.27□□□□□ -0.28
ACTA1P68133 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
ACTA1P68133 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.27□□□□□ -0.28
ACTA1P68133 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
ACTA1P68133 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.27□□□□□ -0.29
ACTA1P68133 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.27□□□□□ -0.29
ACTA1P68133 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.27□□□□□ -0.29
ACTA1P68133 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ACTA1P68133 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms