Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.65■□□□□ 0.1
USP46P62068 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.65■□□□□ 0.1
USP46P62068 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.65■□□□□ 0.1
USP46P62068 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.65■□□□□ 0.1
USP46P62068 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
USP46P62068 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.65■□□□□ 0.1
USP46P62068 AL451050.2-201ENST00000606967 682 ntBASIC15.65■□□□□ 0.1
USP46P62068 AC007663.3-201ENST00000609632 465 ntBASIC15.65■□□□□ 0.1
USP46P62068 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 E2F3P2-201ENST00000447755 1422 ntBASIC15.65■□□□□ 0.1
USP46P62068 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 CICP23-201ENST00000605013 2741 ntBASIC15.65■□□□□ 0.1
USP46P62068 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.65■□□□□ 0.1
USP46P62068 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
USP46P62068 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.65■□□□□ 0.1
USP46P62068 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 AC013726.1-201ENST00000563747 2285 ntBASIC15.64■□□□□ 0.09
USP46P62068 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
USP46P62068 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.64■□□□□ 0.09
USP46P62068 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.64■□□□□ 0.09
USP46P62068 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 AC092723.2-201ENST00000624955 793 ntBASIC15.64■□□□□ 0.09
USP46P62068 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.64■□□□□ 0.09
USP46P62068 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.64■□□□□ 0.09
USP46P62068 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
USP46P62068 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP46P62068 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP46P62068 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
USP46P62068 SHC1P1-201ENST00000425230 1745 ntBASIC15.63■□□□□ 0.09
USP46P62068 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP46P62068 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.63■□□□□ 0.09
USP46P62068 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP46P62068 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
USP46P62068 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms