Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN17P56750 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 AC020910.5-201ENST00000623668 1865 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 AL354989.2-201ENST00000435838 1540 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 AC113367.3-201ENST00000508316 1912 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 RN7SKP230-201ENST00000365642 335 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
CLDN17P56750 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
CLDN17P56750 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 FAM8A4P-201ENST00000435433 1213 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN17P56750 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN17P56750 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN17P56750 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 RAB43P1-201ENST00000561790 589 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.29□□□□□ -0.28
CLDN17P56750 AC138696.2-201ENST00000607376 223 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 AL136172.1-201ENST00000598590 1394 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 INE2-201ENST00000630399 1874 ntBASIC13.29□□□□□ -0.28
CLDN17P56750 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.29□□□□□ -0.28
CLDN17P56750 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.29□□□□□ -0.28
CLDN17P56750 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CLDN17P56750 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN17P56750 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.28□□□□□ -0.28
CLDN17P56750 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
CLDN17P56750 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CLDN17P56750 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 CNN2P8-201ENST00000421872 913 ntBASIC13.28□□□□□ -0.28
CLDN17P56750 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CLDN17P56750 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.28□□□□□ -0.28
CLDN17P56750 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CLDN17P56750 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CLDN17P56750 AL391280.1-201ENST00000506969 1062 ntBASIC13.28□□□□□ -0.28
CLDN17P56750 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN17P56750 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.28□□□□□ -0.28
CLDN17P56750 AC106886.1-201ENST00000568660 600 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms