Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CDH8P55286 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 AC015688.4-201ENST00000580780 1647 ntBASIC15.8■□□□□ 0.12
CDH8P55286 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH8P55286 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH8P55286 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 BRWD1P1-201ENST00000401091 371 ntBASIC15.8■□□□□ 0.12
CDH8P55286 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.8■□□□□ 0.12
CDH8P55286 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH8P55286 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 MIR4538-201ENST00000581377 78 ntBASIC15.8■□□□□ 0.12
CDH8P55286 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 AC091271.1-201ENST00000611877 1162 ntBASIC15.8■□□□□ 0.12
CDH8P55286 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDH8P55286 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CDH8P55286 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDH8P55286 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDH8P55286 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.8■□□□□ 0.12
CDH8P55286 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CDH8P55286 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 FAM86MP-201ENST00000340703 885 ntBASIC15.79■□□□□ 0.12
CDH8P55286 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH8P55286 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH8P55286 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH8P55286 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 ACTBP11-201ENST00000436287 1126 ntBASIC15.79■□□□□ 0.12
CDH8P55286 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 HSPB1P2-201ENST00000448722 546 ntBASIC15.79■□□□□ 0.12
CDH8P55286 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 AL591846.1-201ENST00000451736 433 ntBASIC15.79■□□□□ 0.12
CDH8P55286 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 AC005730.2-201ENST00000564549 1184 ntBASIC15.79■□□□□ 0.12
CDH8P55286 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH8P55286 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 AC027601.3-201ENST00000622907 509 ntBASIC15.79■□□□□ 0.12
CDH8P55286 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.79■□□□□ 0.12
CDH8P55286 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.79■□□□□ 0.12
CDH8P55286 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDH8P55286 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDH8P55286 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms