Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.36■□□□□ 0.05
NEK3P51956 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.36■□□□□ 0.05
NEK3P51956 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NEK3P51956 BEND3P1-201ENST00000421591 1944 ntBASIC15.36■□□□□ 0.05
NEK3P51956 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.36■□□□□ 0.05
NEK3P51956 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.36■□□□□ 0.05
NEK3P51956 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.36■□□□□ 0.05
NEK3P51956 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.36■□□□□ 0.05
NEK3P51956 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NEK3P51956 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NEK3P51956 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.35■□□□□ 0.05
NEK3P51956 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.35■□□□□ 0.05
NEK3P51956 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NEK3P51956 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NEK3P51956 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NEK3P51956 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
NEK3P51956 FAM21FP-201ENST00000426241 1131 ntBASIC15.35■□□□□ 0.05
NEK3P51956 FAM197Y7-201ENST00000432892 766 ntBASIC15.35■□□□□ 0.05
NEK3P51956 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.35■□□□□ 0.05
NEK3P51956 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.35■□□□□ 0.05
NEK3P51956 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.35■□□□□ 0.05
NEK3P51956 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.35■□□□□ 0.05
NEK3P51956 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.35■□□□□ 0.05
NEK3P51956 AC138951.2-201ENST00000623455 1161 ntBASIC15.35■□□□□ 0.05
NEK3P51956 AL033527.4-201ENST00000641026 673 ntBASIC15.35■□□□□ 0.05
NEK3P51956 MYO15B-237ENST00000642007 4893 ntBASIC15.35■□□□□ 0.05
NEK3P51956 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NEK3P51956 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.35■□□□□ 0.05
NEK3P51956 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NEK3P51956 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 AC152010.1-201ENST00000415779 2006 ntBASIC15.34■□□□□ 0.05
NEK3P51956 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.34■□□□□ 0.05
NEK3P51956 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
NEK3P51956 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.34■□□□□ 0.05
NEK3P51956 AC092135.3-201ENST00000624151 1846 ntBASIC15.34■□□□□ 0.05
NEK3P51956 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NEK3P51956 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NEK3P51956 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
NEK3P51956 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.34■□□□□ 0.05
NEK3P51956 YBX1P6-201ENST00000442962 1002 ntBASIC15.34■□□□□ 0.05
NEK3P51956 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 RNA5SP412-201ENST00000516234 123 ntBASIC15.34■□□□□ 0.05
NEK3P51956 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.34■□□□□ 0.05
NEK3P51956 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
NEK3P51956 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.34■□□□□ 0.05
NEK3P51956 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.34■□□□□ 0.05
NEK3P51956 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NEK3P51956 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms