Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.09□□□□□ -0.15
CLK1P49759 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
CLK1P49759 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CLK1P49759 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CLK1P49759 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CLK1P49759 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.08□□□□□ -0.15
CLK1P49759 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLK1P49759 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.08□□□□□ -0.16
CLK1P49759 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLK1P49759 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.08□□□□□ -0.16
CLK1P49759 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.08□□□□□ -0.16
CLK1P49759 KRT18P64-201ENST00000434946 1219 ntBASIC14.08□□□□□ -0.16
CLK1P49759 FAM207CP-201ENST00000443486 507 ntBASIC14.08□□□□□ -0.16
CLK1P49759 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.08□□□□□ -0.16
CLK1P49759 RRP7BP-205ENST00000566851 833 ntBASIC14.08□□□□□ -0.16
CLK1P49759 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.08□□□□□ -0.16
CLK1P49759 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.08□□□□□ -0.16
CLK1P49759 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.08□□□□□ -0.16
CLK1P49759 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.08□□□□□ -0.16
CLK1P49759 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.08□□□□□ -0.16
CLK1P49759 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLK1P49759 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLK1P49759 AC084364.1-201ENST00000551967 1556 ntBASIC14.08□□□□□ -0.16
CLK1P49759 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLK1P49759 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLK1P49759 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLK1P49759 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.08□□□□□ -0.16
CLK1P49759 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.08□□□□□ -0.16
CLK1P49759 ACE3P-201ENST00000423435 1973 ntBASIC14.07□□□□□ -0.16
CLK1P49759 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 AL121723.1-201ENST00000445194 1519 ntBASIC14.07□□□□□ -0.16
CLK1P49759 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CLK1P49759 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 DOC2GP-202ENST00000514950 1163 ntBASIC14.07□□□□□ -0.16
CLK1P49759 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.07□□□□□ -0.16
CLK1P49759 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 RARRES2P5-201ENST00000564013 466 ntBASIC14.07□□□□□ -0.16
CLK1P49759 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.07□□□□□ -0.16
CLK1P49759 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.07□□□□□ -0.16
CLK1P49759 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 MIR193BHG-211ENST00000641433 5365 ntBASIC14.07□□□□□ -0.16
CLK1P49759 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLK1P49759 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.07□□□□□ -0.16
CLK1P49759 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLK1P49759 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms