Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.23□□□□□ -0.45
NKX2-1P43699 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 AL133215.2-201ENST00000609242 977 ntBASIC12.23□□□□□ -0.45
NKX2-1P43699 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.23□□□□□ -0.45
NKX2-1P43699 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
NKX2-1P43699 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
NKX2-1P43699 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 AC023794.5-201ENST00000564380 2157 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 MIR574-201ENST00000385209 96 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-1P43699 MIR940-201ENST00000401276 94 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 AC004945.1-201ENST00000416738 983 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 MCCD1P2-201ENST00000423228 335 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 MTND6P24-201ENST00000440466 518 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-1P43699 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-1P43699 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.22□□□□□ -0.45
NKX2-1P43699 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ALG1L8P-201ENST00000533887 760 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 AL591122.2-201ENST00000624125 1853 ntBASIC12.22□□□□□ -0.45
NKX2-1P43699 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NKX2-1P43699 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.22□□□□□ -0.45
NKX2-1P43699 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.22□□□□□ -0.45
NKX2-1P43699 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NKX2-1P43699 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NKX2-1P43699 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms