Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CHRNA4P43681 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CHRNA4P43681 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA4P43681 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 AC027601.5-201ENST00000624065 2482 ntBASIC14.97□□□□□ -0.01
CHRNA4P43681 AC006001.1-201ENST00000325130 474 ntBASIC14.97□□□□□ -0.01
CHRNA4P43681 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.97□□□□□ -0.01
CHRNA4P43681 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.97□□□□□ -0.01
CHRNA4P43681 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.97□□□□□ -0.01
CHRNA4P43681 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA4P43681 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.97□□□□□ -0.01
CHRNA4P43681 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.97□□□□□ -0.01
CHRNA4P43681 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.97□□□□□ -0.01
CHRNA4P43681 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CHRNA4P43681 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.97□□□□□ -0.01
CHRNA4P43681 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA4P43681 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CHRNA4P43681 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CHRNA4P43681 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 AC015688.4-201ENST00000580780 1647 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CHRNA4P43681 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA4P43681 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA4P43681 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 AC004945.1-201ENST00000416738 983 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA4P43681 AC026954.1-201ENST00000429771 1293 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 RPL7P3-201ENST00000441388 714 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 CTBP2P5-201ENST00000454986 1264 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 COX5BP1-201ENST00000507622 393 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA4P43681 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.96□□□□□ -0.01
CHRNA4P43681 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 AL162274.1-201ENST00000617191 1098 ntBASIC14.96□□□□□ -0.01
CHRNA4P43681 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.96□□□□□ -0.01
CHRNA4P43681 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CHRNA4P43681 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CHRNA4P43681 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms