Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.94□□□□□ -0.02
MDH1P40925 CICP1-201ENST00000416803 2410 ntBASIC14.94□□□□□ -0.02
MDH1P40925 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
MDH1P40925 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.94□□□□□ -0.02
MDH1P40925 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 AL355306.1-201ENST00000415580 579 ntBASIC14.94□□□□□ -0.02
MDH1P40925 AC004066.1-201ENST00000502488 802 ntBASIC14.94□□□□□ -0.02
MDH1P40925 AC106730.1-201ENST00000566722 1090 ntBASIC14.94□□□□□ -0.02
MDH1P40925 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
MDH1P40925 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 MKRN5P-201ENST00000445263 1467 ntBASIC14.94□□□□□ -0.02
MDH1P40925 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.94□□□□□ -0.02
MDH1P40925 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
MDH1P40925 POM121L14P-201ENST00000406100 1558 ntBASIC14.94□□□□□ -0.02
MDH1P40925 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
MDH1P40925 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 AC136604.1-202ENST00000425471 771 ntBASIC14.93□□□□□ -0.02
MDH1P40925 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 HLA-K-203ENST00000430151 1046 ntBASIC14.93□□□□□ -0.02
MDH1P40925 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 RNA5SP415-201ENST00000517246 115 ntBASIC14.93□□□□□ -0.02
MDH1P40925 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 LINC01225-203ENST00000563550 1244 ntBASIC14.93□□□□□ -0.02
MDH1P40925 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 AC105021.1-202ENST00000570572 669 ntBASIC14.93□□□□□ -0.02
MDH1P40925 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.93□□□□□ -0.02
MDH1P40925 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.93□□□□□ -0.02
MDH1P40925 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.93□□□□□ -0.02
MDH1P40925 AC125807.2-201ENST00000513358 3514 ntBASIC14.93□□□□□ -0.02
MDH1P40925 DLX4-206ENST00000611342 1662 ntBASIC14.93□□□□□ -0.02
MDH1P40925 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
MDH1P40925 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
MDH1P40925 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MDH1P40925 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.92□□□□□ -0.02
MDH1P40925 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MDH1P40925 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
MDH1P40925 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
MDH1P40925 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms