Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 AC018442.1-201ENST00000421439 2061 ntBASIC16.3■□□□□ 0.2
USP8P40818 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
USP8P40818 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.3■□□□□ 0.2
USP8P40818 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.29■□□□□ 0.2
USP8P40818 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP8P40818 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP8P40818 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP8P40818 AL645937.2-201ENST00000396808 931 ntBASIC16.29■□□□□ 0.2
USP8P40818 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
USP8P40818 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 PIN1P1-201ENST00000412108 996 ntBASIC16.29■□□□□ 0.2
USP8P40818 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 ELK1P1-201ENST00000485699 580 ntBASIC16.29■□□□□ 0.2
USP8P40818 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 TERF1P3-201ENST00000505638 1227 ntBASIC16.29■□□□□ 0.2
USP8P40818 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.29■□□□□ 0.2
USP8P40818 AC190387.1-201ENST00000551683 408 ntBASIC16.29■□□□□ 0.2
USP8P40818 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 CTBP2P3-201ENST00000585629 1255 ntBASIC16.29■□□□□ 0.2
USP8P40818 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
USP8P40818 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
USP8P40818 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
USP8P40818 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.29■□□□□ 0.2
USP8P40818 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
USP8P40818 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.28■□□□□ 0.2
USP8P40818 AC140479.7-201ENST00000636301 2332 ntBASIC16.28■□□□□ 0.2
USP8P40818 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 RNU1-114P-201ENST00000365297 166 ntBASIC16.28■□□□□ 0.2
USP8P40818 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.28■□□□□ 0.2
USP8P40818 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
USP8P40818 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 WASH4P-201ENST00000564273 1246 ntBASIC16.28■□□□□ 0.2
USP8P40818 AC140912.1-201ENST00000577171 1054 ntBASIC16.28■□□□□ 0.2
USP8P40818 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.28■□□□□ 0.2
USP8P40818 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
USP8P40818 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
USP8P40818 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
USP8P40818 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.27■□□□□ 0.2
USP8P40818 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
USP8P40818 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
USP8P40818 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
USP8P40818 DMBT1P1-203ENST00000636837 4628 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms