Protein–RNA interactions for Protein: P32247

BRS3, Bombesin receptor subtype-3, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRS3P32247 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
BRS3P32247 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
BRS3P32247 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 BOLA2P3-201ENST00000404566 256 ntBASIC12.3□□□□□ -0.44
BRS3P32247 KLF2P2-201ENST00000416807 1039 ntBASIC12.3□□□□□ -0.44
BRS3P32247 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 AC022616.1-201ENST00000518688 554 ntBASIC12.3□□□□□ -0.44
BRS3P32247 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
BRS3P32247 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.3□□□□□ -0.44
BRS3P32247 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.3□□□□□ -0.44
BRS3P32247 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.3□□□□□ -0.44
BRS3P32247 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 CICP17-201ENST00000418553 2377 ntBASIC12.3□□□□□ -0.44
BRS3P32247 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 AC023024.2-201ENST00000623561 1993 ntBASIC12.3□□□□□ -0.44
BRS3P32247 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
BRS3P32247 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.3□□□□□ -0.44
BRS3P32247 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
BRS3P32247 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
BRS3P32247 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.29□□□□□ -0.44
BRS3P32247 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BRS3P32247 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
BRS3P32247 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
BRS3P32247 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 PEG13-201ENST00000631594 5667 ntBASIC12.29□□□□□ -0.44
BRS3P32247 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
BRS3P32247 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.29□□□□□ -0.44
BRS3P32247 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.29□□□□□ -0.44
BRS3P32247 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BRS3P32247 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.29□□□□□ -0.44
BRS3P32247 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms