Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CD40LGP29965 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CD40LGP29965 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.23□□□□□ -0.29
CD40LGP29965 AL031719.1-201ENST00000623365 2587 ntBASIC13.23□□□□□ -0.29
CD40LGP29965 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 AL445209.1-201ENST00000607269 3491 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 MED15P5-201ENST00000423150 992 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 PRYP6-201ENST00000514804 343 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 AC106730.1-201ENST00000566722 1090 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40LGP29965 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CD40LGP29965 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.22□□□□□ -0.29
CD40LGP29965 AC023141.13-201ENST00000604991 943 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 FAM197Y3-203ENST00000618346 717 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.22□□□□□ -0.29
CD40LGP29965 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CD40LGP29965 Z98257.2-202ENST00000641138 1548 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CD40LGP29965 AC011498.7-201ENST00000624986 2027 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 AL136982.4-201ENST00000437689 1740 ntBASIC13.22□□□□□ -0.29
CD40LGP29965 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.22□□□□□ -0.29
CD40LGP29965 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 AP3S2-216ENST00000617003 1561 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 AL022342.1-201ENST00000400363 863 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 KRT18P58-201ENST00000527480 1120 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 AC096734.2-201ENST00000562054 433 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 ACTL9-202ENST00000612068 1252 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CD40LGP29965 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
CD40LGP29965 RN7SL832P-201ENST00000607781 1756 ntBASIC13.21□□□□□ -0.29
CD40LGP29965 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CD40LGP29965 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.21□□□□□ -0.3
CD40LGP29965 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
CD40LGP29965 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.21□□□□□ -0.3
CD40LGP29965 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CD40LGP29965 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms