Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.47□□□□□ -0.25
GDF1P27539 E2F3P2-201ENST00000447755 1422 ntBASIC13.47□□□□□ -0.25
GDF1P27539 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
GDF1P27539 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 KRT8P29-201ENST00000420409 1371 ntBASIC13.46□□□□□ -0.25
GDF1P27539 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
GDF1P27539 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.46□□□□□ -0.25
GDF1P27539 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 AC144831.1-201ENST00000573312 2656 ntBASIC13.46□□□□□ -0.25
GDF1P27539 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GDF1P27539 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
GDF1P27539 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.46□□□□□ -0.25
GDF1P27539 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.46□□□□□ -0.25
GDF1P27539 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.46□□□□□ -0.25
GDF1P27539 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 GCOM2-201ENST00000509133 1104 ntBASIC13.46□□□□□ -0.25
GDF1P27539 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.46□□□□□ -0.25
GDF1P27539 AC131206.1-201ENST00000538078 1211 ntBASIC13.46□□□□□ -0.25
GDF1P27539 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.46□□□□□ -0.25
GDF1P27539 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 AC103810.3-201ENST00000583567 96 ntBASIC13.46□□□□□ -0.25
GDF1P27539 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 AL023803.2-201ENST00000620080 638 ntBASIC13.46□□□□□ -0.25
GDF1P27539 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
GDF1P27539 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.46□□□□□ -0.25
GDF1P27539 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
GDF1P27539 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
GDF1P27539 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.46□□□□□ -0.25
GDF1P27539 AC104640.1-201ENST00000562617 2109 ntBASIC13.46□□□□□ -0.26
GDF1P27539 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.46□□□□□ -0.26
GDF1P27539 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.46□□□□□ -0.26
GDF1P27539 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.46□□□□□ -0.26
GDF1P27539 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.46□□□□□ -0.26
GDF1P27539 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
GDF1P27539 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 AL136172.1-201ENST00000598590 1394 ntBASIC13.45□□□□□ -0.26
GDF1P27539 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 AC018735.1-201ENST00000437208 1502 ntBASIC13.45□□□□□ -0.26
GDF1P27539 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
GDF1P27539 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.45□□□□□ -0.26
GDF1P27539 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.45□□□□□ -0.26
GDF1P27539 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.45□□□□□ -0.26
GDF1P27539 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.45□□□□□ -0.26
GDF1P27539 AC010141.1-201ENST00000411585 623 ntBASIC13.45□□□□□ -0.26
GDF1P27539 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.45□□□□□ -0.26
GDF1P27539 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.45□□□□□ -0.26
GDF1P27539 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.45□□□□□ -0.26
GDF1P27539 DUX4L46-201ENST00000566845 751 ntBASIC13.45□□□□□ -0.26
GDF1P27539 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
GDF1P27539 AC020914.3-201ENST00000594712 304 ntBASIC13.45□□□□□ -0.26
GDF1P27539 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms