Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 NKAIN1P1-201ENST00000435754 582 ntBASIC12.55□□□□□ -0.4
COL8A2P25067 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.55□□□□□ -0.4
COL8A2P25067 RNMTL1P1-201ENST00000454103 560 ntBASIC12.55□□□□□ -0.4
COL8A2P25067 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.55□□□□□ -0.4
COL8A2P25067 AL139099.5-201ENST00000635274 300 ntBASIC12.55□□□□□ -0.4
COL8A2P25067 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
COL8A2P25067 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
COL8A2P25067 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
COL8A2P25067 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 ACE3P-201ENST00000423435 1973 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 SHC1P1-201ENST00000425230 1745 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
COL8A2P25067 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
COL8A2P25067 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.54□□□□□ -0.4
COL8A2P25067 SERPINA13P-202ENST00000478994 924 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 AC044849.1-201ENST00000519737 1188 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.54□□□□□ -0.4
COL8A2P25067 MIR4783-201ENST00000580343 82 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COL8A2P25067 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
COL8A2P25067 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COL8A2P25067 E2F3P2-201ENST00000447755 1422 ntBASIC12.54□□□□□ -0.4
COL8A2P25067 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.53□□□□□ -0.4
COL8A2P25067 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.53□□□□□ -0.4
COL8A2P25067 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COL8A2P25067 AC104581.4-201ENST00000623126 3052 ntBASIC12.53□□□□□ -0.4
COL8A2P25067 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms