Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CAPN3P20807 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CAPN3P20807 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.36□□□□□ -0.11
CAPN3P20807 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 KRT17P8-201ENST00000540749 863 ntBASIC14.36□□□□□ -0.11
CAPN3P20807 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.36□□□□□ -0.11
CAPN3P20807 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 CLK3P2-201ENST00000427566 1453 ntBASIC14.36□□□□□ -0.11
CAPN3P20807 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CAPN3P20807 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CAPN3P20807 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CAPN3P20807 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 KRT8P24-201ENST00000560290 1559 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 AC130686.1-201ENST00000622936 2466 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 DRD5P1-201ENST00000456605 1438 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
CAPN3P20807 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ZNF890P-202ENST00000530367 1156 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.35□□□□□ -0.11
CAPN3P20807 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPN3P20807 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 IGHV3-72-202ENST00000621503 303 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 AC107918.4-201ENST00000641966 3141 ntBASIC14.35□□□□□ -0.11
CAPN3P20807 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CAPN3P20807 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPN3P20807 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN3P20807 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms